
Leif Groop
Principal investigator

MuscleAtlasExplorer : a web service for studying gene expression in human skeletal muscle
Author
Summary, in English
MuscleAtlasExplorer is a freely available web application that allows for the exploration of gene expression data from human skeletal muscle. It draws from an extensive publicly available dataset of 1654 skeletal muscle expression microarray samples. Detailed, manually curated, patient phenotype data, with information such as age, sex, BMI and disease status, are combined with skeletal muscle gene expression to provide insights into gene function in skeletal muscle. It aims to facilitate easy exploration of the data using powerful data visualization functions, while allowing for sample selection, in-depth inspection and further analysis using external tools. Availability: MuscleAtlasExplorer is available at https://mae.crc.med.lu.se/mae2 (username 'muscle' and password 'explorer' pre-publication).
Department/s
- Genomics, Diabetes and Endocrinology
- EXODIAB: Excellence of Diabetes Research in Sweden
Publishing year
2020-12-18
Language
English
Publication/Series
Database: the journal of biological databases and curation
Volume
2020
Document type
Journal article
Publisher
Oxford University Press
Topic
- Bioinformatics and Systems Biology
- Medical Genetics
Keywords
- database tool
Status
Published
Research group
- Genomics, Diabetes and Endocrinology
ISBN/ISSN/Other
- ISSN: 1758-0463