Ashfaq Ali
Bioinformatician
Publications
Displaying of publications. Sorted by year, then title.
Single-cell analysis of myeloid cells in HPV+ tonsillar cancer
David Gomez Jimenez, Can Altunbulakli, Sabine Swoboda, Aastha Sobti, David Askmyr, et al.
(2022) BioRxiv
PreprintPlasma proteome profiling of healthy individuals across the life span in a Sicilian cohort with long-lived individuals
Valentina Siino, Ashfaq Ali, Giulia Accardi, Anna Aiello, Mattia E. Ligotti, et al.
(2022) Aging Cell, 21
Journal articleHypoxia induces radioresistance, epithelial?mesenchymal transition, cancer stem cell?like phenotype and changes in genes possessing multiple biological functions in head and neck squamous cell carcinoma
Emilia Wiechec, Natasa Matic, Ashfaq Ali, Karin Roberg
(2022) Oncology Reports, 47
Journal articleWeakened resilience of benthic microbial communities in the face of climate change
Laura Seidel, Marcelo Ketzer, Elias Broman, Sina Shahabi-Ghahfarokhi, Mahboubeh Rahmati-Abkenar, et al.
(2022) ISME Communications, 2
Journal articleDistinct Molecular Signatures of Clinical Clusters in People with Type 2 Diabetes : an IMIRHAPSODY Study
Roderick C Slieker, Louise A Donnelly, Hugo Fitipaldi, Gerard A Bouland, Giuseppe N Giordano, et al.
(2021) Diabetes, 70 p.2683-2693
Journal articleReplication and cross-validation of type 2 diabetes subtypes based on clinical variables : an IMI-RHAPSODY study
Roderick C Slieker, Louise A Donnelly, Hugo Fitipaldi, Gerard A Bouland, Giuseppe N Giordano, et al.
(2021) Diabetologia, 64 p.1982-1989
Journal articleLipidomic profiles, lipid trajectories and clinical biomarkers in female elite endurance athletes
Tibor V Varga, Ashfaq Ali, Jose A R Herrera, Linda L Ahonen, Ismo M Mattila, et al.
(2020) Scientific Reports, 10 p.1-9
Journal articlePrimary fatty amides in plasma associated with brain amyloid burden, hippocampal volume, and memory in the European Medical Information Framework for Alzheimer's Disease biomarker discovery cohort
Min Kim, Ashfaq Ali, Cristina Legido-Quigley
(2019) Alzheimer's and Dementia, 15 p.817-827
Journal articleSaturated fat is more metabolically harmful for the human liver than unsaturated fat or simple sugars
Panu K. Luukkonen, Ashfaq Ali, Marju Orho-Melander, Hannele Yki-Järvinen
(2018) Diabetes Care, 41 p.1732-1739
Journal articleStratification of type 2 diabetes based on routine clinical markers
Narges Safai, Ashfaq Ali, Peter Rossing, Martin Ridderstråle
(2018) Diabetes Research and Clinical Practice, 141 p.275-283
Journal articlePlant immunity in natural populations and agricultural fields : Low presence of pathogenesis-related proteins in Solanum leaves
Åsa Lankinen, Kibrom B Abreha, Laura Masini, Ashfaq Ali, Svante Resjö, et al.
(2018) PLoS ONE, 13 p.0207253-0207253
Journal articleProteomic analysis of phytophthora infestans reveals the importance of cell wall proteins in pathogenicity
Svante Resjö, Maja Brus, Ashfaq Ali, Harold J. G. Meijer, Marianne Sandin, et al.
(2017) Molecular and Cellular Proteomics, 16 p.1958-1971
Journal articleEvidence-based prioritisation and enrichment of genes interacting with metformin in type 2 diabetes
Adem Y. Dawed, Ashfaq Ali, Kaixin Zhou, Ewan R Pearson, Paul W. Franks
(2017) Diabetologia, 60 p.2231-2239
Journal articleHuman adipogenesis is associated with genome-wide DNA methylation and gene-expression changes
Christa Broholm, Anders Henrik Olsson, Alexander Perfilyev, Linn Gillberg, Ninna Schiøler Hansen, et al.
(2016) Epigenomics, 8 p.1601-1617
Journal articleStatistical power considerations in genotype-based recall randomized controlled trials
Naeimeh Atabaki-Pasdar, Mattias Ohlsson, Dmitry Shungin, Azra Kurbasic, Erik Ingelsson, et al.
(2016) Scientific Reports, 6
Journal articleDo Genetic Factors Modify the Relationship Between Obesity and Hypertriglyceridemia? : Findings From the GLACIER and the MDC Studies
Ashfaq Ali, Tibor V Varga, Ivana Stojkovic, Christina-Alexandra Schulz, Göran Hallmans, et al.
(2016) Circulation: Cardiovascular Genetics, 9 p.162-171
Journal articleEffector-driven marker development and cloning of resistance genes against Phytophthora infestans in potato breeding clone SW93-1015
Marit Lenman, Ashfaq Ali, Per Mühlenbock, Ulrika Carlson-Nilsson, Erland Liljeroth, et al.
(2016) Theoretical And Applied Genetics, 129 p.15-105
Journal articleGene × physical activity interactions in obesity: combined analysis of 111,421 individuals of European ancestry. : combined analysis of 111,421 individuals of European ancestry
Shafqat Ahmad, Gull Rukh, Tibor V Varga, Ashfaq Ali, Azra Kurbasic, et al.
(2013) PLoS Genetics, 9 p.1003607-1003607
Journal articlePlant secretome proteomics
Erik Alexandersson, Ashfaq Ali, Svante Resjö, Erik Andreasson
(2013) Frontiers in Plant Science, 4
Journal articleParanoid potato : phytophthora-resistant genotype shows constitutively activated defense
Ashfaq Ali, Laith Ibrahim Moushib, Marit Lenman, Fredrik Levander, Kerstin Olsson, et al.
(2012) Plant Signaling and Behavior, 7 p.400-408
Journal articleTwo thymidine kinases and one multisubstrate deoxyribonucleoside kinase salvage DNA precursors in Arabidopsis thaliana.
Anders Ranegaard Clausen, Lenart Girandon, Ashfaq Ali, Wolfgang Knecht, Elzbieta Rozpedowska, et al.
(2012) The FEBS Journal, 279 p.3889-3897
Journal article